Gene model: LOC_Os11g05930.2

Species: Oryza sativa subsp. japonica Locus LOC_Os11g05930 Gene model LOC_Os11g05930.2 Description response regulator receiver domain containing protein, expressed Family Pseudo ARR-B 3D structure (top 5) 1K68 1MB3 3HEB 1K66 1W25
	PDB entry: 1K68 1MB3 3HEB 1K66 1W25 2JBA 2AYX 3GT7 1QKK 2QVG 3DZD 2QXY 2PL1 3BRE 1MVO 2QZJ 3CNB 1I3C 3HDV 3C3M 1ZH2 3CRN 1JBE 3GRC 1P6Q 2RJN 3CWO 1XHF 3CFY 2JK1 2ZAY 3H5I 3CG4 1DZ3 3HDG 1S8N 1ZGZ 1NY5 2R25 2QR3 1TMY 2A9O 1DBW 2QV0 1DC7 1DCF 3B2N 2GKG 1SRR 3EUL 3CU5 2QSJ 3CZ5 3CG0 2OQR 1YS7 3EQZ 2PLN 3C97 2B4A 1KGS 1QO0 3F6C 1P2F 1YIO 2GWR 2J48 2RDM 1A2O 2HQR 1A04 3C3W

• Gramene
• Rice Genome Annotation Project - MSU

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT5G24470.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g05930.1 Score: 1
LOC_Os11g05930.2 Score: 0.901
LOC_Os11g05930.3 Score: 0.901

Chlamydomonas reinhardtii

166515 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g05930.1 Score: 1
LOC_Os11g05930.2 Score: 0.912
LOC_Os11g05930.3 Score: 0.912
LOC_Os11g05930.4 Score: 0.901

Micromonas pusilla CCMP1545

48139 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g05930.1 Score: 1
LOC_Os11g05930.2 Score: 0.912
LOC_Os11g05930.3 Score: 0.912
LOC_Os11g05930.4 Score: 0.901

Ostreococcus lucimarinus

29755 Score: 1
41670 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g05930.1 Score: 1
LOC_Os11g05930.2 Score: 0.915
LOC_Os11g05930.3 Score: 0.915
LOC_Os11g05930.4 Score: 0.905

Ostreococcus tauri

23022 Score: 1

Oryza sativa subsp. japonica

LOC_Os11g05930.1 Score: 1
LOC_Os11g05930.2 Score: 0.916
LOC_Os11g05930.3 Score: 0.916
LOC_Os11g05930.4 Score: 0.905

• MPSS data
• NCBI EST Profile Viewer (UniGene: Hv.18813)
• NCBI EST Profile Viewer (UniGene: Hv.30069)
• NCBI EST Profile Viewer (UniGene: Os.12795)
• NCBI EST Profile Viewer (UniGene: Sbi.4549)

Hv.18813

HVSMEl0021L16f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEl0021L16f, mRNA sequence /clone=HVSMEl0021L16f /gb=BI950619

Hv.30069

HV_CEa0013J20r2 Hordeum vulgare (Blumeria challenged) seedling green leaf cDNA library HV_CEa (HVcDNA0004)2 Hordeum vulgare subsp. vulgare cDNA clone HV__Ea0002J21f, mRNA sequence /clone=HV__Ea0002J21f /gb=GH207356

Os.12795

Oryza sativa Japonica Group cDNA clone:J013001E13, full insert sequence /gb=AK120059

Sbi.4549

ANR1_21_D05.b1_A002 Anaerobic roots Sorghum bicolor cDNA clone ANR1_21_D05_A002 3', mRNA sequence /clone=ANR1_21_D05_A002 /clone_end=3' /gb=CX610840 /gi=57809560

protein sequence
transcript sequence