Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: LOC_Os12g41230.3

Identification

Species:
Oryza sativa subsp. japonica
Locus
LOC_Os12g41230
Gene model
LOC_Os12g41230.3
Description
tesmin/TSO1-like CXC domain containing protein, expressed
Family
CPP

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Sorghum bicolor

4989961 Score: 1

Oryza sativa subsp. japonica

LOC_Os12g41230.1 Score: 1
LOC_Os12g41230.2 Score: 1
LOC_Os12g41230.3 Score: 1

Selaginella moellendorffii

443191 Score: 1

Oryza sativa subsp. japonica

LOC_Os12g41230.1 Score: 1
LOC_Os12g41230.2 Score: 1
LOC_Os12g41230.3 Score: 1

Zea mays

GRMZM2G044182_P01 Score: 1

Oryza sativa subsp. japonica

LOC_Os12g41230.1 Score: 1
LOC_Os12g41230.2 Score: 1
LOC_Os12g41230.3 Score: 1

Expression data

Expressed Sequence Tags

Hv.20896
HVSMEi0023E19f Hordeum vulgare 20 DAP spike EST library HVcDNA0010 (20 DAP) Hordeum vulgare subsp. vulgare cDNA clone HVSMEi0023E19f, mRNA sequence /clone=HVSMEi0023E19f /gb=BG369235
Os.18579
Oryza sativa Japonica Group cDNA clone:J033075J10, full insert sequence /cds=p(220,2502) /gb=AK073942
Os.75387
Oryza sativa Japonica Group cDNA, clone: J090050H19, full insert sequence /gb=AK242750
Sbi.14261
NIT1_32_E09.g1_A002 Nitrogen-deficient seedlings Sorghum bicolor cDNA clone NIT1_32_E09_A002 5', mRNA sequence /clone=NIT1_32_E09_A002 /clone_end=5' /gb=CF434216 /gi=34446917
Vvi.8262
VV_PEd02c07.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241717

Domain Architecture

CXC PF03638 LOC_Os12g41230.3
DomainStartEndBit scoreE-value
CXC45449575.22.4e-19
CXC53958083.48.3e-22

Sequences