Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD002361

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD002361
Description
Chr01_3756,1152,,,1,1152,
Family
HSF
3D structure (top 5)
1HKS 3HTS 1C1G 2EFR 1CII
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Os.51916
Oryza sativa Japonica Group cDNA clone:002-105-E08, full insert sequence /gb=AK064271
Os.80361
Oryza sativa (japonica cultivar-group) Os06g0565200 (Os06g0565200) mRNA, complete cds /cds=p(1,996) /gb=NM_001064424
Pba.6450
WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777
Pth.6450
WS02543.B21_C13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_C13 3', mRNA sequence /clone=WS02543_C13 /clone_end=3' /gb=DT489777
Vvi.24263
VVB181A04_414523 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB181A04 5, mRNA sequence /clone=VVB181A04 /clone_end=5' /gb=CD721308

Domain Architecture

HSF_DNA-bind PF00447 OsIBCD002361
DomainStartEndBit scoreE-value
HSF_DNA-bind72243173.46e-49

Sequences