Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD002714

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD002714
Description
Chr01_4295,1002,,,1,1002,
Family
C3H
3D structure (top 5)
1M9O 2E5S 2CQE 2RPP 3D2N
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Os.30567
Oryza sativa Japonica Group cDNA clone:002-148-E11, full insert sequence /gb=AK108658
Os.54644
Oryza sativa Japonica Group cDNA clone:002-102-A03, full insert sequence /cds=p(160,1191) /gb=AK106354
Pba.2501
WS01914.B21_C20 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01914_C20 3', mRNA sequence /clone=WS01914_C20 /clone_end=3' /gb=CV229704
Pth.2501
WS01914.B21_C20 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01914_C20 3', mRNA sequence /clone=WS01914_C20 /clone_end=3' /gb=CV229704

Domain Architecture

zf-CCCH PF00642 OsIBCD002714
DomainStartEndBit scoreE-value
zf-CCCH25928555.32.1e-13
zf-CCCH29732326.69.2e-05

Sequences