Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD002846

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD002846
Description
Chr01_4493,1602,,,1,1602,
Family
HB
3D structure (top 5)
2CUF 1WI3
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.14699
Arabidopsis thaliana WOX9 (STIMPY); transcription factor (WOX9) mRNA, complete cds /cds=p(182,1318) /gb=NM_128948
Os.36185
Oryza sativa Japonica Group cDNA clone:002-104-H12, full insert sequence /gb=AK064236
Os.83369
BI138F21 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI138F21 5', mRNA sequence /clone=BI138F21 /clone_end=5' /gb=CX107530
Os.83840
CI258567 Oryza sativa (japonica cultivar-group) same as Lib 23(supermix) Oryza sativa (japonica cultivar-group) cDNA clone 045-M042R-C03 3', mRNA sequence /clone=045-M042R-C03 /clone_end=3' /gb=CI258567

Domain Architecture

Homeobox PF00046 OsIBCD002846
DomainStartEndBit scoreE-value
Homeobox6612749.99.1e-12

Sequences