Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD003367

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD003367
Description
Chr01_5226,981,,,1,981,
Family
TUB
3D structure (top 5)
2FIM 3C5N
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Os.10160
Oryza sativa (japonica cultivar-group) Os05g0514300 (Os05g0514300) mRNA, complete cds /cds=p(246,1364) /gb=NM_001062568
Os.22785
Oryza sativa Japonica Group cDNA clone:J023048A08, full insert sequence /cds=p(114,1184) /gb=AK070401
Os.31726
Oryza sativa Japonica Group cDNA clone:002-118-B03, full insert sequence /cds=p(68,1174) /gb=AK106853
Os.80328
Oryza sativa (japonica cultivar-group) Os05g0560400 (Os05g0560400) mRNA, complete cds /cds=p(1,1059) /gb=NM_001062843

Domain Architecture

F-box PF00646 OsIBCD003367
DomainStartEndBit scoreE-value
F-box4910419.10.017
Tub1153201452.1e-40

Sequences