Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD003447

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD003447
Description
Chr01_5336,1017,,,1,1017,
Family
SET
3D structure (top 5)
2R3A 3F9X 2RFI 1ML9 3H6L
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.40936
Arabidopsis thaliana SET domain-containing protein (AT3G03750) mRNA, complete cds /cds=p(25,1089) /gb=NM_202483
Os.73676
CI186272 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa (japonica cultivar-group) cDNA clone 035-M063R-A12 3', mRNA sequence /clone=035-M063R-A12 /clone_end=3' /gb=CI186272
Os.91172
Oryza sativa (japonica cultivar-group) Os01g0772100 (Os01g0772100) mRNA, complete cds /cds=p(1,1581) /gb=NM_001050924

Domain Architecture

Pre-SET PF05033 OsIBCD003447
DomainStartEndBit scoreE-value
Pre-SET5017123.73.2e-06
SET173318126.48.3e-35

Sequences