Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD003884

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD003884
Description
Chr01_5977,1839,,,1,1839,
Family
HB
3D structure (top 5)
2DMN 1PUF 1DU6 1B72 1X2N
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Mtr.13534
NF004E06ST1F1000 Developing stem Medicago truncatula cDNA clone NF004E06ST 5', mRNA sequence /clone=NF004E06ST /clone_end=5' /gb=AW688195
Os.19639
Oryza sativa Indica Group mRNA for qSH-1, complete cds /cds=p(450,2288) /gb=AB071330
Os.27062
Oryza sativa Japonica Group cDNA, clone: J043023B19, full insert sequence /gb=AK287476
Os.27308
Oryza sativa Japonica Group cDNA clone:J023133E06, full insert sequence /cds=p(320,2062) /gb=AK100916
Vvi.599
CAbud0006_IVF_D11 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0006_IVF_D11 5', mRNA sequence /clone=CAbud0006_IVF_D11 /clone_end=5' /gb=CF514422

Domain Architecture

POX PF07526 OsIBCD003884
DomainStartEndBit scoreE-value
POX183321221.71.7e-63
Homeobox3724306.40.0026

Sequences