Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD005143

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD005143
Description
Chr02_631,1398,,,1,1398,
Family
C3H
3D structure (top 5)
1C1G 1CII 2CH7 1I84 2DFS
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Hv.1084
EBca01_SQ004_H01_R carpel, pre-anthesis, no treatment, cv Optic, EBca01 Hordeum vulgare subsp. vulgare cDNA clone EBca01_SQ004_H01 5', mRNA sequence /clone=EBca01_SQ004_H01 /clone_end=5' /gb=BQ764511
Os.14747
Oryza sativa Japonica Group cDNA clone:J013000E13, full insert sequence /gb=AK064816
Os.15553
Oryza sativa Japonica Group cDNA, clone: J090041C18, full insert sequence /gb=AK288500
Sbi.15300
EM1_7_A11.g1_A002 Embryo 1 (EM1) Sorghum bicolor cDNA, mRNA sequence /gb=BG049641

Domain Architecture

zf-CCCH PF00642 OsIBCD005143
DomainStartEndBit scoreE-value
zf-CCCH113529.21.5e-05

Sequences