Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD007823

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD007823
Description
Chr02_4912,1509,,,1,1509,
Family
SET
3D structure (top 5)
2H21
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.10573
Arabidopsis thaliana SET domain-containing protein (AT3G07670) mRNA, complete cds /cds=p(44,1558) /gb=NM_111646
Mtr.19378
MTYDZ13TF JCVI-MT1 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EV259708
Os.68728
Oryza sativa Japonica Group cDNA clone:J033133G01, full insert sequence /cds=p(55,1563) /gb=AK103602
Sbi.6846
HS1_20_D07.b1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_20_D07_A012 3', mRNA sequence /clone=HS1_20_D07_A012 /clone_end=3' /gb=CD206017 /gi=30936666
Vvi.10612
WIN021.C21_B04 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN021_B04 3', mRNA sequence /clone=WIN021_B04 /clone_end=3' /gb=EC923411
Vvi.23406
VV_PEa18c10.b1 Vitis vinifera cv. perlette LibA Vitis vinifera cDNA, mRNA sequence /gb=EV229318

Domain Architecture

SET PF00856 OsIBCD007823
DomainStartEndBit scoreE-value
SET73309157.34.3e-44
Rubis-subs-bind334469145.91.1e-40

Sequences