Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD008692

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD008692
Description
Chr03_226,1776,,,1,1776,
Family
HB
3D structure (top 5)
2DMN 1PUF 1B72 1DU6 1X2N
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.14305
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZE03 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX820985
At.48946
Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds /cds=p(853,3072) /gb=AY050459
At.74048
Arabidopsis thaliana BLH7 (BELL1-LIKE HOMEODOMAIN 7); DNA binding / transcription factor (BLH7) mRNA, complete cds /cds=p(548,1996) /gb=NM_127194
Mtr.7013
AC4843 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY618467
Os.11805
Oryza sativa (japonica cultivar-group) Os11g0158600 (Os11g0158600) mRNA, complete cds /cds=p(1,1278) /gb=NM_001072340
Os.17301
Oryza sativa Japonica Group cDNA clone:J013134A07, full insert sequence /cds=p(231,1991) /gb=AK068029
Os.27062
Oryza sativa Japonica Group cDNA, clone: J043023B19, full insert sequence /gb=AK287476
Os.50442
Oryza sativa Japonica Group cDNA clone:J023088C15, full insert sequence /gb=AK121207
Sbi.14265
HS1_50_B01.g1_A012 Heat-shocked seedlings Sorghum bicolor cDNA clone HS1_50_B01_A012 5', mRNA sequence /clone=HS1_50_B01_A012 /clone_end=5' /gb=CD210350 /gi=30945366
Sbi.1439
WOUND1_26_C01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_26_C01_A002 5', mRNA sequence /clone=WOUND1_26_C01_A002 /clone_end=5' /gb=CN145056 /gi=45983936

Domain Architecture

POX PF07526 OsIBCD008692
DomainStartEndBit scoreE-value
POX142274212.51e-60
Homeobox3263844.90.0035

Sequences