Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD010420

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD010420
Description
Chr03_2662,2754,,,1,2754,
Family
Jumonji
3D structure (top 5)
1VRB 2YU1 3D8C 2W2I
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.48390
Arabidopsis thaliana transcription factor jumonji (jmjC) domain-containing protein (AT1G78280) mRNA, complete cds /cds=p(269,3019) /gb=NM_106477
Hv.18772
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf104j02, mRNA sequence /gb=AK251035
Hv.26788
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf133n11, mRNA sequence /gb=AK251910
Os.45975
Oryza sativa Japonica Group cDNA clone:J023030P07, full insert sequence /gb=AK069828
Vvi.18885
WIN0213.TB24_O10 Cab Sauv flower, leaf and root non-normalized (WIN02) Vitis vinifera cDNA clone WIN0213_O10 3', mRNA sequence /clone=WIN0213_O10 /clone_end=3' /gb=EC926904

Domain Architecture

F-box PF00646 OsIBCD010420
DomainStartEndBit scoreE-value
F-box136014.70.36
JmjC21132449.51.2e-11

Sequences