Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD012101

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD012101
Description
Chr03_5542,1164,,,1,1164,
Family
HB
3D structure (top 5)
1X2N 2DMN 1DU6 1PUF 1B72
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Os.57551
Oryza sativa mRNA for knotted1-type homeobox protein OSH43, complete cds /cds=p(299,1324) /gb=AB028884
Os.60741
27908rsicef_3991.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa (indica cultivar-group) cDNA 5', mRNA sequence /clone_end=5' /gb=CK008070
Os.84198
CI241214 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sativa (japonica cultivar-group) cDNA clone 042-M066R-A12 3', mRNA sequence /clone=042-M066R-A12 /clone_end=3' /gb=CI241214

Domain Architecture

KNOX1 PF03790 OsIBCD012101
DomainStartEndBit scoreE-value
KNOX18112580.84.3e-21
KNOX213618875.22.1e-19
ELK21924034.44.1e-07

Sequences