Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD012899

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD012899
Description
Chr04_194,2058,,,1,2058,
Family
C3H
3D structure (top 5)
1VHN 1EP3 1Z41 1GTE 2H8Z
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.31136
Arabidopsis thaliana dihydrouridine synthase family protein (AT4G38890) mRNA, complete cds /cds=p(1,2103) /gb=NM_120049
Hv.12164
HH04F04w HH Hordeum vulgare cDNA clone HH04F04 5-PRIME, mRNA sequence /clone=HH04F04 /clone_end=5' /gb=CB863303
Os.7618
Oryza sativa Japonica Group cDNA clone:J023009K15, full insert sequence /gb=AK111699
Ppa.4017
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_144788) mRNA, partial cds /cds=p(1,801) /gb=XM_001777252
Ptp.8031
N058F07.3pR Populus bark cDNA library Populus tremula x Populus tremuloides cDNA clone N058F07 3', mRNA sequence /clone=N058F07 /clone_end=3' /gb=DN485987
Sbi.16982
FE1_17_C11.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA clone FE1_17_C11_A002 3', mRNA sequence /clone=FE1_17_C11_A002 /clone_end=3' /gb=CF071520 /gi=33108179

Domain Architecture

zf-CCCH PF00642 OsIBCD012899
DomainStartEndBit scoreE-value
zf-CCCH8811718.60.0048
Dus335629170.83.5e-48

Sequences