Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD014349

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD014349
Description
Chr04_2830,1998,,,1,1998,
Family
SET
3D structure (top 5)
2R3A 3F9X 2RFI 1ML9 3H6L
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.70058
Arabidopsis thaliana ASHH1/SDG26 (ASH1-RELATED PROTEIN 1) (ASHH1/SDG26) mRNA, complete cds /cds=p(211,1689) /gb=NM_202429
Hv.22736
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf146l11, mRNA sequence /gb=AK252160
Os.26731
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCPI237O24, full insert sequence /gb=CT831991
Pth.16156
F128P16.3pR Populus flower cDNA library Populus trichocarpa cDNA clone F128P16 3', mRNA sequence /clone=F128P16 /clone_end=3' /gb=CK091823
Sbi.6281
OX1_41_B01.b1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_41_B01_A002 3', mRNA sequence /clone=OX1_41_B01_A002 /clone_end=3' /gb=CN136133 /gi=45968781

Domain Architecture

SET PF00856 OsIBCD014349
DomainStartEndBit scoreE-value
SET260389184.33.1e-52

Sequences