Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD014414

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD014414
Description
Chr04_2921,849,,,1,849,
Family
C3H
3D structure (top 5)
2RPP 3D2N 3D2Q 2E5S 2CQE
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Hv.18469
HVSMEc0008L20f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0008L20f, mRNA sequence /clone=HVSMEc0008L20f /gb=BF618929
Os.51094
Oryza sativa Japonica Group cDNA clone:001-027-B10, full insert sequence /gb=AK060634
Sbi.8530
OX1_10_D08.g1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_10_D08_A002 5', mRNA sequence /clone=OX1_10_D08_A002 /clone_end=5' /gb=CN133180 /gi=45963830

Domain Architecture

zf-CCCH PF00642 OsIBCD014414
DomainStartEndBit scoreE-value
zf-CCCH1061328.60.1
zf-CCCH1411665.80.24
zf-CCCH1832096.80.17
zf-CCCH2132379.70.072

Sequences