Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD016123

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD016123
Description
Chr04_5323,2466,,,1,2466,
Family
SET
3D structure (top 5)
2R3A 3F9X 2RFI 1ML9 3H6L
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.27206
Arabidopsis thaliana Su(VAR)3-9-related protein 4 (SUVR4) mRNA, complete cds /cds=p(216,1682) /gb=AF408062
Hv.28558
HDP33A08w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP33A08, mRNA sequence /clone=HDP33A08 /gb=EX587196
Os.91452
Oryza sativa Japonica Group cDNA clone:J013122N19, full insert sequence /gb=AK067984
Ppa.19113
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_3159) mRNA, partial cds /cds=p(1,966) /gb=XM_001785757
Vvi.20659
WIN0534.C21_N01 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0534_N01 3', mRNA sequence /clone=WIN0534_N01 /clone_end=3' /gb=EC945442

Domain Architecture

Pre-SET PF05033 OsIBCD016123
DomainStartEndBit scoreE-value
Pre-SET4345845.40.00017
SET586733136.86.2e-38

Sequences