Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD018230

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD018230
Description
Chr05_3545,1803,,,1,1803,
Family
HB
3D structure (top 5)
2DMN 1PUF 1B72 1DU6 1X2N
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.23033
Arabidopsis thaliana BLH1 (embryo sac development arrest 29) (BLH1) mRNA, complete cds /cds=p(544,2586) /gb=NM_001036413
Mtr.22349
META209TF JCVI-MT3 Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=EY474128
Os.11805
Oryza sativa (japonica cultivar-group) Os11g0158600 (Os11g0158600) mRNA, complete cds /cds=p(1,1278) /gb=NM_001072340
Os.19639
Oryza sativa Indica Group mRNA for qSH-1, complete cds /cds=p(450,2288) /gb=AB071330
Os.27308
Oryza sativa Japonica Group cDNA clone:J023133E06, full insert sequence /cds=p(320,2062) /gb=AK100916
Vvi.599
CAbud0006_IVF_D11 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0006_IVF_D11 5', mRNA sequence /clone=CAbud0006_IVF_D11 /clone_end=5' /gb=CF514422

Domain Architecture

POX PF07526 OsIBCD018230
DomainStartEndBit scoreE-value
POX155313144.33.4e-40
Homeobox3614198.40.0016

Sequences