Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD019157

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD019157
Description
Chr06_91,1059,,,1,1059,
Family
HB
3D structure (top 5)
1X2N 1DU6 1PUF 2DMN 1B72
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.12624
Arabidopsis thaliana BLH4 (SAWTOOTH 2); DNA binding / transcription factor (BLH4) mRNA, complete cds /cds=p(261,2144) /gb=NM_179713
At.16254
Arabidopsis thaliana BLH3 (BLH3) mRNA, complete cds /cds=p(682,2256) /gb=NM_001084358
At.48946
Arabidopsis thaliana AT4g36870/C7A10_490 mRNA, complete cds /cds=p(853,3072) /gb=AY050459
At.50395
Arabidopsis thaliana BLH6 (BELL1-LIKE HOMEODOMAIN 5); DNA binding / transcription factor (BLH6) mRNA, complete cds /cds=p(325,1923) /gb=NM_119627
At.69176
Arabidopsis thaliana At4g34610 gene, complete cds /cds=p(1,1599) /gb=BT012291
At.74119
Arabidopsis thaliana clone 142443 mRNA, complete sequence /cds=p(28,1602) /gb=AY085278
Hv.10278
BJ462078 K. Sato unpublished cDNA library, cv. Akashinriki vegetative stage leaves Hordeum vulgare subsp. vulgare cDNA clone baak21m18 3', mRNA sequence /clone=baak21m18 /clone_end=3' /gb=BJ462078
Hv.12894
HVSMEg0016O14f Hordeum vulgare pre-anthesis spike EST library HVcDNA0008 (white to yellow anther) Hordeum vulgare subsp. vulgare cDNA clone HVSMEg0016O14f, mRNA sequence /clone=HVSMEg0016O14f /gb=BG344928
Mtr.7013
AC4843 NOLLY Medicago truncatula cDNA 5', mRNA sequence /clone_end=5' /gb=DY618467
Os.11805
Oryza sativa (japonica cultivar-group) Os11g0158600 (Os11g0158600) mRNA, complete cds /cds=p(1,1278) /gb=NM_001072340
Os.17301
Oryza sativa Japonica Group cDNA clone:J013134A07, full insert sequence /cds=p(231,1991) /gb=AK068029
Os.21068
Oryza sativa Japonica Group cDNA clone:J013104D06, full insert sequence /gb=AK099829
Os.27062
Oryza sativa Japonica Group cDNA, clone: J043023B19, full insert sequence /gb=AK287476
Sbi.1439
WOUND1_26_C01.g1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_26_C01_A002 5', mRNA sequence /clone=WOUND1_26_C01_A002 /clone_end=5' /gb=CN145056 /gi=45983936
Sbi.8687
GABR1_65_A02.b1_A002 GA- or brassinolide-treated seedlings Sorghum bicolor cDNA clone GABR1_65_A02_A002 3', mRNA sequence /clone=GABR1_65_A02_A002 /clone_end=3' /gb=CX622606 /gi=57821393

Domain Architecture

POX PF07526 OsIBCD019157
DomainStartEndBit scoreE-value
POX16316.71.7e-08
Homeobox1231813.30.0051

Sequences