Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD020881

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD020881
Description
Chr06_3000,1887,,,1,1887,
Family
C3H
3D structure (top 5)
2VSO 1HU3 2I2O 1UW4 1M9O
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Os.15564
Oryza sativa Japonica Group cDNA clone:J013118N03, full insert sequence /cds=p(59,2401) /gb=AK072083
Os.49333
Oryza sativa Japonica Group cDNA clone:001-133-D12, full insert sequence /gb=AK119453
Os.54047
Oryza sativa Japonica Group cDNA clone:J033045L14, full insert sequence /gb=AK101510
Os.97935
Oryza sativa Japonica Group cDNA clone:J013027N14, full insert sequence /gb=AK065553
Vvi.14875
CGF1000602b_C09 Vitis vinifera cv. cabernet sauvignon Stem - CAST Vitis vinifera cDNA clone CAST0001_IR_C09 3', mRNA sequence /clone=CAST0001_IR_C09 /clone_end=3' /gb=CF213519

Domain Architecture

zf-CCCH PF00642 OsIBCD020881
DomainStartEndBit scoreE-value
zf-CCCH618727.64.5e-05
zf-CCCH102128345.5e-07
zf-CCCH16819442.81.2e-09
MIF4G39161963.95.3e-16

Sequences