Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD021096

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD021096
Description
Chr06_3388,996,,,1,996,
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.43861
Arabidopsis thaliana AT-HSFA7A (Arabidopsis thaliana heat shock transcription factor A7A); DNA binding / transcription factor (AT-HSFA7A) mRNA, complete cds /cds=p(1,819) /gb=NM_115050
Os.18587
Oryza sativa Japonica Group cDNA clone:J033067M16, full insert sequence /gb=AK101824
Os.80361
Oryza sativa (japonica cultivar-group) Os06g0565200 (Os06g0565200) mRNA, complete cds /cds=p(1,996) /gb=NM_001064424
Os.9717
Oryza sativa Japonica Group cDNA clone:J023088F14, full insert sequence /cds=p(126,1646) /gb=AK100430
Ppa.16751
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_206139) mRNA, partial cds /cds=p(377,1177) /gb=XM_001758240
Vvi.24263
VVB181A04_414523 An expressed sequence tag database for abiotic stressed leaves of Vitis vinifera var. Chardonnay Vitis vinifera cDNA clone VVB181A04 5, mRNA sequence /clone=VVB181A04 /clone_end=5' /gb=CD721308

Domain Architecture

HSF_DNA-bind PF00447 OsIBCD021096
DomainStartEndBit scoreE-value
HSF_DNA-bind42208179.11.1e-50

Sequences