Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD021295

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD021295
Description
Chr06_3690,1416,,,1,1416,
Family
HB

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Hv.20148
HV_CEa0016K08f Hordeum vulgare seedling green leaf EST library HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEa0016K08f, mRNA sequence /clone=HV_CEa0016K08f /gb=BF266995
Os.26397
EI090D07 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone EI090D07 5', mRNA sequence /clone=EI090D07 /clone_end=5' /gb=CX114644
Os.37009
RECm2958 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone EI079G01, EI079G16, BI145D03 5', mRNA sequence /clone=EI079G01,_EI079G16,_BI145D03 /clone_end=5' /gb=CX101982
Pba.8918
WS02544.B21_P13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02544_P13 3', mRNA sequence /clone=WS02544_P13 /clone_end=3' /gb=DT490438
Pth.8918
WS02544.B21_P13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02544_P13 3', mRNA sequence /clone=WS02544_P13 /clone_end=3' /gb=DT490438
Sbi.8071
WOUND1_42_D09.b1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_42_D09_A002 3', mRNA sequence /clone=WOUND1_42_D09_A002 /clone_end=3' /gb=CN146580 /gi=45986597
Vvi.1668
CGF1000651_B02 Vitis vinifera cv. cabernet sauvignon Stem - CAST Vitis vinifera cDNA clone CAST0005_IF_B02 5', mRNA sequence /clone=CAST0005_IF_B02 /clone_end=5' /gb=CF212881

Domain Architecture

Homeobox PF00046 OsIBCD021295
DomainStartEndBit scoreE-value
Homeobox2422910.60.0094

Sequences