Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD021780

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD021780
Description
Chr06_4421,1632,,,1,1632,
Family
C3H
3D structure (top 5)
2YU6 2YUD 1Y0F 2PNE 2CQE
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.40546
Arabidopsis thaliana ATCPSF30/CPSF30; RNA binding / calmodulin binding / endonuclease/ nucleic acid binding / protein binding (ATCPSF30/CPSF30) mRNA, complete cds /cds=p(80,1975) /gb=NM_102782
Os.68827
Oryza sativa (japonica cultivar-group) Os06g0677700 (Os06g0677700) mRNA, complete cds /cds=p(1,1998) /gb=NM_001064894

Domain Architecture

zf-CCCH PF00642 OsIBCD021780
DomainStartEndBit scoreE-value
zf-CCCH154012.50.031
zf-CCCH416624.20.00048
YTH233327143.56.1e-40

Sequences