Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD022092

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD022092
Description
Chr06_4866,5124,,,1,5124,
Family
ARID
3D structure (top 5)
2OX0 2W2I 2JRZ 2EQY 1C20
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Hv.28107
BES1824111A1e01 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010E0111 5-PRIME, mRNA sequence /clone=MPMGp2010I01111 /clone_end=5' /gb=CK125857
Os.15074
RECm3039 A normalized whole-life-cycle cDNA library of rice Oryza sativa (indica cultivar-group) cDNA clone BI147N16, EI098G19 5', mRNA sequence /clone=BI147N16,_EI098G19 /clone_end=5' /gb=CX102062
Os.80751
18958rsicee_10592.y1 Oryza sativa cv. LYP9 tillering whole plant cDNA library Oryza sativa (indica cultivar-group) cDNA 5', mRNA sequence /clone_end=5' /gb=CF987596

Domain Architecture

JmjN PF02375 OsIBCD022092
DomainStartEndBit scoreE-value
JmjN206490.64.8e-24
ARID8319620.71.5e-06
PHD25830653.85.8e-13
JmjC425538138.91.5e-38
zf-C5HC263867523.70.00023
PLU-18371141-46.32.9e-06

Sequences