Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD024341

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD024341
Description
Chr07_3775,918,,,1,918,
Family
HSF
3D structure (top 5)
1HKS 3HTS
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.49954
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB79ZF11 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX814533
Os.50643
Oryza sativa Japonica Group cDNA clone:001-123-F07, full insert sequence /cds=p(96,1028) /gb=AK063952
Os.61308
Oryza sativa Japonica Group cDNA, clone: J065120N14, full insert sequence /cds=p(114,1298) /gb=AK241190
Os.68844
73289rsicem_6705.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa (indica cultivar-group) cDNA 5', mRNA sequence /clone_end=5' /gb=CK067449
Pba.10851
WS01226.BR_I21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01226_I21 5', mRNA sequence /clone=WS01226_I21 /clone_end=5' /gb=DT472578
Pth.367
Populus trichocarpa clone WS0125_K14 unknown mRNA /cds=p(145,1251) /gb=EF147879

Domain Architecture

HSF_DNA-bind PF00447 OsIBCD024341
DomainStartEndBit scoreE-value
HSF_DNA-bind26242148.41.9e-41

Sequences