Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD024868

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD024868
Description
Chr08_240,1824,,,1,1824,
Family
C3H
3D structure (top 5)
2E5G 3D2W 1WF0 2JVO 2DGO
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.53909
Arabidopsis thaliana RNA recognition motif (RRM)-containing protein (AT3G52980) mRNA, complete cds /cds=p(1,1146) /gb=NM_115158
Os.23145
Oryza sativa Japonica Group cDNA clone:J023082B02, full insert sequence /gb=AK111902
Ppa.22636
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_137259) mRNA, complete cds /cds=p(1,1161) /gb=XM_001771223
Ppa.22867
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_119974) mRNA, complete cds /cds=p(1,1266) /gb=XM_001758199
Sbi.5520
POL1_62_H11.g1_A002 Pollen Sorghum bicolor cDNA clone POL1_62_H11_A002 5', mRNA sequence /clone=POL1_62_H11_A002 /clone_end=5' /gb=CF479967 /gi=34508836

Domain Architecture

zf-CCCH PF00642 OsIBCD024868
DomainStartEndBit scoreE-value
zf-CCCH21524026.69.4e-05

Sequences