Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD027654

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD027654
Description
Chr09_366,2457,,,1,2457,
Family
SET
3D structure (top 5)
2W5Y 2RFI 3F9X 1H3I 3H6L
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.14356
Arabidopsis thaliana ATX1 (ARABIDOPSIS HOMOLOGUE OF TRITHORAX); histone-lysine N-methyltransferase/ phosphatidylinositol-5-phosphate binding (ATX1) mRNA, complete cds /cds=p(1,3189) /gb=NM_179839
At.46306
Arabidopsis thaliana mRNA for tri-thorax like protein, clone: RAFL07-12-E24 /gb=AK226560
Hv.15798
HVSMEl0010L24f Hordeum vulgare spike EST library HVcDNA0012 (Fusarium infected) Hordeum vulgare subsp. vulgare cDNA clone HVSMEl0010L24f, mRNA sequence /clone=HVSMEl0010L24f /gb=BI948766
Os.7059
Oryza sativa Japonica Group cDNA clone:J033074A15, full insert sequence /cds=p(186,3254) /gb=AK074022

Domain Architecture

PWWP PF00855 OsIBCD027654
DomainStartEndBit scoreE-value
PWWP238322352.7e-07
FYRC37645965.12.4e-16
SET661818132.11.6e-36

Sequences