Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD028272

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD028272
Description
Chr09_1534,1053,,,1,1053,
Family
C3H
3D structure (top 5)
1M9O 2CQE 2OIK 2D9N 2E5S
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.29358
Arabidopsis thaliana At5g56900 mRNA sequence /gb=AY080699
Hv.20202
BES1824107f02 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010F027 5-PRIME, mRNA sequence /clone=MPMGp2010F02107 /clone_end=5' /gb=CK124179
Mtr.9639
EST670069 MTUS Medicago truncatula cDNA clone MTUS-19C8, mRNA sequence /clone=MTUS-19C8 /gb=CF069348
Os.49315
Oryza sativa Japonica Group cDNA clone:J033043A02, full insert sequence /gb=AK111875
Vvi.1609
CAB40004_IVa_Fa_G09 Cabernet Sauvignon Berry - CAB4 Vitis vinifera cDNA clone CAB40004_IVa_Fa_G09 5', mRNA sequence /clone=CAB40004_IVa_Fa_G09 /clone_end=5' /gb=CB977715

Domain Architecture

zf-CCCH PF00642 OsIBCD028272
DomainStartEndBit scoreE-value
zf-CCCH568220.50.0027
zf-CCCH8811424.80.00032
CwfJ_C_1123244158.32.1e-44
CwfJ_C_2253349100.84.3e-27

Sequences