Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD028360

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD028360
Description
Chr09_1688,1029,,,1,1029,
Family
HB
3D structure (top 5)
1NK2 2R5Y 1AU7 3CMY 1FTT
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Hv.30429
HVSMEf0018I10f Hordeum vulgare seedling root EST library HVcDNA0007 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEf0018I10f, mRNA sequence /clone=HVSMEf0018I10f /gb=BF259252
Os.52806
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA112M06, full insert sequence /gb=CT837895
Os.56903
Oryza sativa Japonica Group cDNA clone:J023110A12, full insert sequence /gb=AK100634
Os.92100
Oryza sativa Japonica Group cDNA clone:J023010P22, full insert sequence /gb=AK069390
Sbi.8568
RHOH1_45_C07.b1_A002 Acid- and alkaline-treated roots Sorghum bicolor cDNA clone RHOH1_45_C07_A002 3', mRNA sequence /clone=RHOH1_45_C07_A002 /clone_end=3' /gb=CN130975 /gi=45960013

Domain Architecture

Homeobox PF00046 OsIBCD028360
DomainStartEndBit scoreE-value
Homeobox227772.41.5e-18
HALZ7812239.41.3e-08

Sequences