Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD030516

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD030516
Description
Chr10_1853,1056,,,1,1056,
Family
HB
3D structure (top 5)
1AU7 1B72 2CRA 1B8I 1NK2
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.41313
Arabidopsis thaliana mRNA for putative homeobox-leucine zipper protein, complete cds, clone: RAFL16-20-K05 /cds=p(114,974) /gb=AK228890
At.68137
987288 CERES-148 Arabidopsis thaliana cDNA clone 147623 3', mRNA sequence /clone=147623 /clone_end=3' /gb=DR380834
Hv.12185
BES1824102g23 BES1824 Hordeum vulgare subsp. vulgare cDNA clone MPMGp2010G232 5-PRIME, mRNA sequence /clone=MPMGp2010G23102 /clone_end=5' /gb=CK122216
Mtr.1797
EST646165 HOGA Medicago truncatula cDNA clone HOGA-27L15, mRNA sequence /clone=HOGA-27L15 /gb=CB893373
Os.2364
Oryza sativa Japonica Group cDNA clone:001-127-B05, full insert sequence /gb=AK105484
Os.70514
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA049M06, full insert sequence /gb=CT837749

Domain Architecture

Homeobox PF00046 OsIBCD030516
DomainStartEndBit scoreE-value
Homeobox10415875.71.5e-19
HALZ15920349.21.5e-11

Sequences