Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD031572

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD031572
Description
Chr10_3427,2082,,,1,2082,
Family
Jumonji
3D structure (top 5)
2OX0 2W2I
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.55411
Arabidopsis thaliana transcription factor jumonji (jmj) family protein (AT5G46910) mRNA, complete cds /cds=p(1,2124) /gb=NM_124062
Os.7130
Oryza sativa Japonica Group cDNA clone:J033044E04, full insert sequence /cds=p(259,2835) /gb=AK073475
Os.89742
64117rsicek_9687.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa (indica cultivar-group) cDNA 5', mRNA sequence /clone_end=5' /gb=CK055388

Domain Architecture

JmjN PF02375 OsIBCD031572
DomainStartEndBit scoreE-value
JmjN12516944.53.8e-10
JmjC301429140.74e-39

Sequences