Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD033255

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD033255
Description
Chr11_2792,1581,,,1,1581,
Family
Jumonji
3D structure (top 5)
1VRB 2YU1 3D8C 2W2I 2OX0
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.49785
Arabidopsis thaliana mRNA for putative protein, complete cds, clone: RAFL25-23-P18 /cds=p(8,1516) /gb=AK176695
Hv.7036
HDP33M01w HDP Hordeum vulgare subsp. vulgare cDNA clone HDP33M01, mRNA sequence /clone=HDP33M01 /gb=EX586682
Os.35279
Oryza sativa Japonica Group cDNA clone:J013145N15, full insert sequence /gb=AK068220
Os.81945
CR287046 Oryza sativa library (Han B) Oryza sativa cDNA clone p747c12p5, mRNA sequence /clone=p747c12p5 /gb=CR287046
Ppa.19046
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_139383) mRNA, complete cds /cds=p(1,1533) /gb=XM_001772885

Domain Architecture

F-box PF00646 OsIBCD033255
DomainStartEndBit scoreE-value
F-box10315020.90.0047
JmjC332443291.9e-06

Sequences