Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD043155

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD043155
Description
Chr07_3153,2016,,,1,2016,
Family
C3H
3D structure (top 5)
1OY3 2FO1 3D9H 1YCS 2AJA
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Hv.23976
HVSMEc0016D15f Hordeum vulgare seedling shoot EST library HVcDNA0003 (Etiolated and unstressed) Hordeum vulgare subsp. vulgare cDNA clone HVSMEc0016D15f, mRNA sequence /clone=HVSMEc0016D15f /gb=BG310058
Hv.9387
HVSMEb0001B23f Hordeum vulgare seedling shoot EST library HVcDNA0002 (Dehydration stress) Hordeum vulgare subsp. vulgare cDNA clone HVSMEb0001B23f, mRNA sequence /clone=HVSMEb0001B23f /gb=BF626703
Mtr.12130
EST646389 HOGA Medicago truncatula cDNA clone HOGA-28M8, mRNA sequence /clone=HOGA-28M8 /gb=CB893597
Os.14948
Oryza sativa Japonica Group cDNA clone:J013123G12, full insert sequence /cds=p(251,2224) /gb=AK067895
Sbi.17965
LG1_292_E12.b1_A002 Light Grown 1 (LG1) Sorghum bicolor cDNA, mRNA sequence /gb=AW564424
Vvi.19078
VV_PEd01a07.g1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV241477

Domain Architecture

Ank PF00023 OsIBCD043155
DomainStartEndBit scoreE-value
Ank6810022.30.0019
Ank10413933.39.1e-07
zf-CCCH27530133.38.7e-07
zf-CCCH3113331.80.8

Sequences