Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD043438

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD043438
Description
Chr08_264,582,,,1,582,
Family
CSD
3D structure (top 5)
1H95 1MJC 2YTY 1C9O 3CAM
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.1680
45-L021843-065-003-A03S-SeLB MPIZ-ADIS-065d Arabidopsis thaliana cDNA clone 003-A03, mRNA sequence /clone=003-A03 /gb=DR750668
At.24348
glycine-rich protein {clone atGRP-2} [Arabidopsis thaliana, C24, mRNA, 965 nt] /cds=p(56,667) /gb=S47408
At.73207
Arabidopsis thaliana CSDP2/GRP2 (COLD SHOCK DOMAIN PROTEIN 2, GLYCINE RICH PROTEIN 2); nucleic acid binding (CSDP2/GRP2) mRNA, complete cds /cds=p(332,943) /gb=NM_120029
Hv.22816
HVSMEn0005B12f Hordeum vulgare rachis EST library HVcDNA0015 (normal) Hordeum vulgare subsp. vulgare cDNA clone HVSMEn0005B12f, mRNA sequence /clone=HVSMEn0005B12f /gb=BI956744
Os.4724
Oryza sativa Japonica Group cDNA clone:J023061H10, full insert sequence /gb=AK070711
Os.54054
Oryza sativa Japonica Group cDNA, clone: J100044F18, full insert sequence /gb=AK243227
Ppa.15638
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_180264) mRNA, complete cds /cds=p(263,826) /gb=XM_001760093
Ppa.598
Physcomitrella patens subsp. patens predicted protein (PHYPADRAFT_183211) mRNA, complete cds /cds=p(1,597) /gb=XM_001763837

Domain Architecture

CSD PF00313 OsIBCD043438
DomainStartEndBit scoreE-value
CSD572129.31.1e-35
zf-CCHC13114838.42.6e-08
zf-CCHC17319040.27.4e-09

Sequences