Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD043903

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD043903
Description
Chr08_3014,3516,,,1,3516,
Family
SET
3D structure (top 5)
2R3A 1ML9 2RFI 1MVH 3FDE
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

Os.24676
Oryza sativa Japonica Group cDNA, clone: J090013J09, full insert sequence /gb=AK318571
Os.52449
Oryza sativa Japonica Group cDNA clone:J013096C06, full insert sequence /gb=AK067187
Os.52835
Oryza sativa Japonica Group cDNA clone:J023022E24, full insert sequence /cds=p(94,2877) /gb=AK069520
Os.80495
Oryza sativa (japonica cultivar-group) Os08g0399500 (Os08g0399500) mRNA, complete cds /cds=p(1,2118) /gb=NM_001068283
Os.80559
Oryza sativa (japonica cultivar-group) Os08g0400200 (Os08g0400200) mRNA, complete cds /cds=p(1,3879) /gb=NM_001068288

Domain Architecture

YDG_SRA PF02182 OsIBCD043903
DomainStartEndBit scoreE-value
YDG_SRA713868190.73.6e-54
Pre-SET89298977.83.6e-20
SET99111481806.2e-51

Sequences