Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: OsIBCD046587

Identification

Species:
Oryza sativa subsp. indica
Gene model
OsIBCD046587
Description
Chr12_1300,993,,,1,993,
Family
Jumonji
3D structure (top 5)
2OX0 2W2I
PDB entry:

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

INPARANOID could not detect any orthologs for this gene model

Expression data

Expressed Sequence Tags

At.3169
Arabidopsis thaliana REF6 (RELATIVE OF EARLY FLOWERING 6); transcription factor (REF6) mRNA, complete cds /cds=p(1,4083) /gb=NM_148863
Os.48706
Oryza sativa (japonica cultivar-group) Os12g0279100 (Os12g0279100) mRNA, complete cds /cds=p(164,4264) /gb=NM_001073104
Os.52727
Oryza sativa Japonica Group cDNA clone:J023001N18, full insert sequence /gb=AK068952

Domain Architecture

JmjN PF02375 OsIBCD046587
DomainStartEndBit scoreE-value
JmjN216437.54.7e-08
JmjC216306181.8e-05

Sequences