Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_1.428

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_1.428
Family
LOB

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

861018 Score: 1

Arabidopsis thaliana

AT5G06080.1 Score: 1

Populus trichocarpa

770335 Score: 1

Sorghum bicolor

4968271 Score: 1

Vitis vinifera

GSVIVP00018439001 Score: 1

Zea mays

GRMZM2G092542_P01 Score: 1
GRMZM2G140368_P01 Score: 1
GRMZM2G180900_P03 Score: 1
GRMZM2G092542_P02 Score: 0.919
GRMZM2G140368_P02 Score: 0.919

Expression data

Expressed Sequence Tags

At.27201
Arabidopsis thaliana LOB DOMAIN 29 (LBD29) mRNA, complete cds /cds=p(71,727) /gb=AF447893
At.65491
Arabidopsis thaliana ASL24 mRNA for ASYMMETRIC LEAVES2-like 24 protein, complete cds /cds=p(41,574) /gb=AB473857
Os.60616
Oryza sativa (japonica cultivar-group) adventitious rootless1 (ARL1) mRNA, complete cds /cds=p(1,780) /gb=AY736375

Domain Architecture

DUF260 PF03195 evm.TU.supercontig_1.428
DomainStartEndBit scoreE-value
DUF2607108216.95.2e-62

Sequences