Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_108.53

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_108.53
Family
C3H
3D structure (top 5)
1X4G 2CQG 1U6F 2YTC 1X4A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

347147 Score: 1

Arabidopsis thaliana

AT3G27700.1 Score: 1
AT3G27700.2 Score: 1

Oryza sativa subsp. japonica

LOC_Os04g32340.1 Score: 1

Physcomitrella patens

88147 Score: 1

Populus trichocarpa

752498 Score: 1

Sorghum bicolor

5057103 Score: 1

Selaginella moellendorffii

437689 Score: 1

Vitis vinifera

GSVIVP00020684001 Score: 1

Expression data

Expressed Sequence Tags

At.8026
Arabidopsis thaliana RNA recognition motif (RRM)-containing protein (AT3G27700) mRNA, complete cds /cds=p(399,3125) /gb=NM_180677

Domain Architecture

zf-CCCH PF00642 evm.TU.supercontig_108.53
DomainStartEndBit scoreE-value
zf-CCCH21223816.40.01
RRM_146352730.85.6e-06

Sequences