Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_110.15

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_110.15
Family
LOB

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

919595 Score: 1

Arabidopsis thaliana

AT5G63090.1 Score: 1
AT5G63090.2 Score: 1
AT5G63090.3 Score: 1
AT5G63090.4 Score: 1

Physcomitrella patens

27856 Score: 1

Populus trichocarpa

423258 Score: 1

Sorghum bicolor

4803024 Score: 1

Selaginella moellendorffii

68988 Score: 1

Vitis vinifera

GSVIVP00016010001 Score: 1

Zea mays

GRMZM2G059329_P01 Score: 1

Expression data

Expressed Sequence Tags

At.27202
Arabidopsis thaliana LBD25 (LOB DOMAIN-CONTAINING PROTEIN 25) (LBD25) mRNA, complete cds /cds=p(186,665) /gb=NM_113681
At.27203
Arabidopsis thaliana AS2 (ASYMMETRIC LEAVES 2) (AS2) mRNA, complete cds /cds=p(558,1157) /gb=NM_105235
At.28568
Arabidopsis thaliana LOB (LATERAL ORGAN BOUNDARIES) (LOB) mRNA, complete cds /cds=p(445,1005) /gb=NM_180923
At.28843
Arabidopsis thaliana ASL1 (LATERAL ORGAN BOUNDARIES domain gene 36) (ASL1) mRNA, complete cds /cds=p(318,1259) /gb=NM_126086
At.74385
Arabidopsis thaliana ASL4 mRNA for ASYMMETRIC LEAVES2-like 4 protein, complete cds /cds=p(290,850) /gb=AB473837
Os.18280
Oryza sativa Japonica Group cDNA clone:001-127-G05, full insert sequence /cds=p(296,1051) /gb=AK105527
Pba.9054
WS02521.B21_E04 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02521_E04 3', mRNA sequence /clone=WS02521_E04 /clone_end=3' /gb=DT482959
Ppa.18639
CAYZ14192.fwd CAYZ Physcomitrella patens subsp. patens Villersexel - regular (L) Physcomitrella patens subsp. patens cDNA clone CAYZ14192 5', mRNA sequence /clone=CAYZ14192 /clone_end=5' /gb=FC383141
Pth.9054
WS02521.B21_E04 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02521_E04 3', mRNA sequence /clone=WS02521_E04 /clone_end=3' /gb=DT482959
Vvi.15374
SBB01373 Inflorescence (VvS11) Vitis vinifera cDNA clone SBB01373, mRNA sequence /clone=SBB01373 /gb=EE102273
Vvi.16411
CAbud0007_IIF_F11 Vitis vinifera cv. cabernet sauvignon (Clone 8) Bud - CABUD Vitis vinifera cDNA clone CAbud0007_IIF_F11 5', mRNA sequence /clone=CAbud0007_IIF_F11 /clone_end=5' /gb=CF513695

Domain Architecture

DUF260 PF03195 evm.TU.supercontig_110.15
DomainStartEndBit scoreE-value
DUF26010110240.63.7e-69

Sequences