Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_115.11

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_115.11
Family
HB

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Oryza sativa subsp. japonica

LOC_Os06g39906.1 Score: 1

Populus trichocarpa

561871 Score: 1

Sorghum bicolor

5011106 Score: 1

Vitis vinifera

GSVIVP00032619001 Score: 1

Zea mays

GRMZM2G084642_P01 Score: 1
GRMZM2G163641_P01 Score: 1

Expression data

Expressed Sequence Tags

At.43457
Arabidopsis thaliana OCP3 (OVEREXPRESSOR OF CATIONIC PEROXIDASE 3) (OCP3) mRNA, complete cds /cds=p(23,1087) /gb=NM_121165
Hv.20148
HV_CEa0016K08f Hordeum vulgare seedling green leaf EST library HVcDNA0004 (Blumeria challenged) Hordeum vulgare subsp. vulgare cDNA clone HV_CEa0016K08f, mRNA sequence /clone=HV_CEa0016K08f /gb=BF266995
Pba.8918
WS02544.B21_P13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02544_P13 3', mRNA sequence /clone=WS02544_P13 /clone_end=3' /gb=DT490438
Pth.8918
WS02544.B21_P13 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02544_P13 3', mRNA sequence /clone=WS02544_P13 /clone_end=3' /gb=DT490438
Sbi.8071
WOUND1_42_D09.b1_A002 Wounded leaves Sorghum bicolor cDNA clone WOUND1_42_D09_A002 3', mRNA sequence /clone=WOUND1_42_D09_A002 /clone_end=3' /gb=CN146580 /gi=45986597
Vvi.1668
CGF1000651_B02 Vitis vinifera cv. cabernet sauvignon Stem - CAST Vitis vinifera cDNA clone CAST0005_IF_B02 5', mRNA sequence /clone=CAST0005_IF_B02 /clone_end=5' /gb=CF212881

Domain Architecture

Homeobox PF00046 evm.TU.supercontig_115.11
DomainStartEndBit scoreE-value
Homeobox2753297.40.0022

Sequences