Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_13.232

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_13.232
Family
C3H
3D structure (top 5)
2E5S 2RPP 3D2N 3D2Q 1M9O
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

487583 Score: 1

Arabidopsis thaliana

AT5G07500.1 Score: 1

Chlorella sp. NC64A

16757 Score: 1

Physcomitrella patens

141405 Score: 1
149412 Score: 1
149443 Score: 1

Vitis vinifera

GSVIVP00014226001 Score: 1

Chlamydomonas reinhardtii

182666 Score: 1

Expression data

Expressed Sequence Tags

At.5234
Arabidopsis thaliana zinc finger transcription factor (PEI1) mRNA, complete cds /cds=p(97,834) /gb=AF050463
Vvi.1914
WIN083.C21_J15 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN083_J15 3', mRNA sequence /clone=WIN083_J15 /clone_end=3' /gb=EC960443

Domain Architecture

zf-CCCH PF00642 evm.TU.supercontig_13.232
DomainStartEndBit scoreE-value
zf-CCCH608518.80.0051
zf-CCCH9511711.1

Sequences