Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_131.1

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_131.1
Family
MED6

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

479655 Score: 1

Arabidopsis thaliana

AT3G21350.1 Score: 1

Cyanidioschyzon merolae

CMT286C Score: 1

Oryza sativa subsp. japonica

LOC_Os06g11370.1 Score: 1

Physcomitrella patens

47270 Score: 1

Populus trichocarpa

276485 Score: 1

Sorghum bicolor

146721 Score: 1

Selaginella moellendorffii

58063 Score: 1

Vitis vinifera

GSVIVP00034251001 Score: 1

Zea mays

GRMZM2G017537_P01 Score: 1
GRMZM2G017537_P03 Score: 1
GRMZM2G114411_P01 Score: 1
GRMZM2G114411_P02 Score: 1

Expression data

Expressed Sequence Tags

At.8297
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB51ZD02 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX822593
Mtr.10270
EST430543 GVSN Medicago truncatula cDNA clone pGVSN-13M5, mRNA sequence /clone=pGVSN-13M5 /gb=BE998756
Os.32942
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA113P10, full insert sequence /gb=CT830946
Pba.6749
WS02536.B21_G22 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02536_G22 3', mRNA sequence /clone=WS02536_G22 /clone_end=3' /gb=DT488437
Ppa.6136
CAYY12873.rev CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY12873 3', mRNA sequence /clone=CAYY12873 /clone_end=3' /gb=FC330243
Pth.2617
WS02536.B21_G22 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02536_G22 3', mRNA sequence /clone=WS02536_G22 /clone_end=3' /gb=DT488437
Vvi.8962
SBB06877 Inflorescence (VvS11) Vitis vinifera cDNA clone SBB06877, mRNA sequence /clone=SBB06877 /gb=EE104937

Domain Architecture

MED6 PF04934 evm.TU.supercontig_131.1
DomainStartEndBit scoreE-value
MED688169111.33.2e-30

Sequences