Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_1455.2

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_1455.2
Family
MADS
3D structure (top 5)
1MNM 1N6J 1EGW 1HBX 1K6O
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Carica papaya

evm.TU.supercontig_106.16 Score: 1
evm.TU.supercontig_1455.2 Score: 1
evm.TU.supercontig_348.5 Score: 1
evm.TU.supercontig_758.4 Score: 0.928

Vitis vinifera

GSVIVP00038600001 Score: 1
GSVIVP00038603001 Score: 1

Expression data

Expressed Sequence Tags

At.29160
Arabidopsis thaliana MADS-box protein AGL62 (AGL62) mRNA, complete cds /cds=p(36,935) /gb=EU493093

Domain Architecture

SRF-TF PF00319 evm.TU.supercontig_1455.2
DomainStartEndBit scoreE-value
SRF-TF146483.57.5e-22

Sequences