Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_16.58

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_16.58
Family
BSD
3D structure (top 5)
1X3A
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

497083 Score: 1

Arabidopsis thaliana

AT4G13110.1 Score: 1

Oryza sativa subsp. japonica

LOC_Os01g16670.1 Score: 1

Physcomitrella patens

172536 Score: 1

Populus trichocarpa

565291 Score: 1

Selaginella moellendorffii

416268 Score: 1

Zea mays

GRMZM2G013378_P01 Score: 1

Expression data

Expressed Sequence Tags

Mtr.12706
NF001G08PH1F1066 Phoma-infected Medicago truncatula cDNA clone NF001G08PH 5', mRNA sequence /clone=NF001G08PH /clone_end=5' /gb=BQ138303
Vvi.20360
WIN0523.C21_O13 Cab Sauv flower, leaf and root normalized (WIN05) Vitis vinifera cDNA clone WIN0523_O13 3', mRNA sequence /clone=WIN0523_O13 /clone_end=3' /gb=EC941845

Domain Architecture

BSD PF03909 evm.TU.supercontig_16.58
DomainStartEndBit scoreE-value
BSD19825966.51e-16

Sequences