Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_171.42

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_171.42
Family
mTERF

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

915404 Score: 1

Arabidopsis thaliana

AT4G14605.1 Score: 1

Micromonas pusilla CCMP1545

54140 Score: 1

Micromonas sp. RCC299

100789 Score: 1

Ostreococcus lucimarinus

39628 Score: 1

Oryza sativa subsp. japonica

LOC_Os02g39040.1 Score: 1

Ostreococcus tauri

30400 Score: 1

Physcomitrella patens

186088 Score: 1

Sorghum bicolor

4756858 Score: 1

Vitis vinifera

GSVIVP00020547001 Score: 1

Zea mays

GRMZM2G024550_P01 Score: 1

Expression data

Expressed Sequence Tags

At.33263
Arabidopsis thaliana mitochondrial transcription termination factor-related / mTERF-related (AT4G14605) mRNA, complete cds /cds=p(155,1489) /gb=NM_117541
Os.35065
Oryza sativa Japonica Group cDNA clone:J023007P20, full insert sequence /gb=AK069111
Sbi.6721
OX1_24_F03.b1_A002 Oxidatively-stressed leaves and roots Sorghum bicolor cDNA clone OX1_24_F03_A002 3', mRNA sequence /clone=OX1_24_F03_A002 /clone_end=3' /gb=CN139806 /gi=45975330

Domain Architecture

mTERF PF02536 evm.TU.supercontig_171.42
DomainStartEndBit scoreE-value
mTERF154460123.66.6e-34

Sequences