Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_187.21

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_187.21
Family
SET
3D structure (top 5)
2R3A 1H3I 3F9X 2RFI 1ML9
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Micromonas pusilla CCMP1545

21435 Score: 1

Ostreococcus tauri

4775 Score: 1

Sorghum bicolor

4748868 Score: 1

Vitis vinifera

GSVIVP00032732001 Score: 1

Expression data

Expressed Sequence Tags

Os.87730
Oryza sativa Japonica Group cDNA clone:002-110-B02, full insert sequence /gb=AK112101
Os.93737
82233rsicen_20540.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa (indica cultivar-group) cDNA 5', mRNA sequence /clone_end=5' /gb=CK082312
Ppa.21072
CAYY5174.fwd CAYY Physcomitrella patens subsp. patens Villersexel - regular (H) Physcomitrella patens subsp. patens cDNA clone CAYY5174 5', mRNA sequence /clone=CAYY5174 /clone_end=5' /gb=FC367220
Pth.14003
WS0193.B21_H16 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0193_H16 3', mRNA sequence /clone=WS0193_H16 /clone_end=3' /gb=CV231075
Sbi.4414
FE1_16_G08.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA clone FE1_16_G08_A002 3', mRNA sequence /clone=FE1_16_G08_A002 /clone_end=3' /gb=CF071203 /gi=33107862

Domain Architecture

SET PF00856 evm.TU.supercontig_187.21
DomainStartEndBit scoreE-value
SET170303147.83.3e-41

Sequences