Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_195.31

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_195.31
Family
NAC
3D structure (top 5)
1UT7
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

481629 Score: 1

Arabidopsis thaliana

AT5G22290.1 Score: 1

Populus trichocarpa

199890 Score: 1

Vitis vinifera

GSVIVP00037297001 Score: 1

Expression data

Expressed Sequence Tags

At.1032
Arabidopsis thaliana putative NAC2 protein (At3g49530) mRNA, complete cds /cds=p(197,1606) /gb=AY059734
At.20744
Arabidopsis thaliana no apical meristem (NAM) family protein (AT4G35580) mRNA, complete cds /cds=p(58,1662) /gb=NM_001125650
At.36167
Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS7ZC02 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) /gb=BX823820
At.40004
Arabidopsis thaliana ANAC014 (ANAC014) mRNA, complete cds /cds=p(29,1987) /gb=NM_202225
At.52935
Arabidopsis thaliana ANAC040/NTL8 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 40); transcription factor (ANAC040/NTL8) mRNA, complete cds /cds=p(1,1008) /gb=NM_128289
At.65025
Arabidopsis thaliana TIP mRNA, complete cds /cds=p(198,1553) /gb=AF281062
Hv.4825
Hordeum vulgare subsp. vulgare cDNA clone: FLbaf54a18, mRNA sequence /gb=AK249749
Os.8787
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCRA203B11, full insert sequence /gb=CT832968

Domain Architecture

NAM PF02365 evm.TU.supercontig_195.31
DomainStartEndBit scoreE-value
NAM26153229.49e-66

Sequences