Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_2.204

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_2.204
Family
Tify

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

479270 Score: 1

Arabidopsis thaliana

AT3G17860.2 Score: 1
AT3G17860.1 Score: 0.935
AT3G17860.3 Score: 0.906

Oryza sativa subsp. japonica

LOC_Os09g23660.2 Score: 1
LOC_Os09g23660.1 Score: 0.958

Populus trichocarpa

822061 Score: 1

Selaginella moellendorffii

447809 Score: 1

Vitis vinifera

GSVIVP00030572001 Score: 1

Zea mays

GRMZM2G058529_P02 Score: 1

Expression data

Expressed Sequence Tags

Mtr.22144
EST1225631 MTY Medicago truncatula cDNA clone MTYAK14, mRNA sequence /clone=MTYAK14 /gb=DW016670
Pba.4109
WS02514.B21.1_E09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02514_E09 3', mRNA sequence /clone=WS02514_E09 /clone_end=3' /gb=CV242147
Pba.4785
WS02527.B21_M21 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02527_M21 3', mRNA sequence /clone=WS02527_M21 /clone_end=3' /gb=DT485288
Pth.16579
Populus trichocarpa clone WS0128_M17 unknown mRNA /cds=p(204,1220) /gb=EF148216
Pth.617
WS02527.B21_M21 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02527_M21 3', mRNA sequence /clone=WS02527_M21 /clone_end=3' /gb=DT485288
Vvi.7174
WIN0818.C21_A05 Cab Sauv seed normalized (WIN08) Vitis vinifera cDNA clone WIN0818_A05 3', mRNA sequence /clone=WIN0818_A05 /clone_end=3' /gb=EC965396

Domain Architecture

tify PF06200 evm.TU.supercontig_2.204
DomainStartEndBit scoreE-value
tify11314869.99.1e-18
CCT_224927551.53.2e-12

Sequences