Plant Transcription factor database - Universität Potsdam
version: 3.0

Gene model: evm.TU.supercontig_26.173

Identification

Species:
Carica papaya
Gene model
evm.TU.supercontig_26.173
Family
HB
3D structure (top 5)
2CUF 2DMS 2R5Y 2DA6 1PUF
PDB entry:

Genome Databases

Orthologs and co-orthologs (in-paralogs)

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis thaliana

AT1G20700.1 Score: 1

Expression data

Expressed Sequence Tags

At.2408
Arabidopsis thaliana HB-4/WOX13 (WUSCHEL-RELATED HOMEOBOX 13); DNA binding / transcription factor (HB-4/WOX13) mRNA, complete cds /cds=p(140,946) /gb=NM_119720
Mtr.10477
EST402719 KV1 Medicago truncatula cDNA clone pKV1-2J20, mRNA sequence /clone=pKV1-2J20 /gb=BE202697
Mtr.4297
Medicago truncatula clone MTYFD_FE_FF_FG1G-O-14 unknown mRNA /cds=p(183,977) /gb=BT052569
Os.24893
Oryza sativa (indica cultivar-group) cDNA clone:OSIGCFA244H01, full insert sequence /gb=CT829377
Ptp.135
Populus tremula X Populus tremuloides mRNA for homeodomain protein HB1 /cds=p(137,790) /gb=AJ010810
Ptp.9520
Populus tremula X Populus tremuloides mRNA for Homeodomain protein HB2, partial /cds=p(1,787) /gb=AJ010811
Vvi.4480
S1G01859 Fruits and flowers treated with GA3 (VvS1) Vitis vinifera cDNA clone S1G01859, mRNA sequence /clone=S1G01859 /gb=EE076126

Domain Architecture

Homeobox PF00046 evm.TU.supercontig_26.173
DomainStartEndBit scoreE-value
Homeobox8214369.41.3e-17

Sequences