Gene model: evm.TU.supercontig_26.174

Species: Carica papaya Gene model evm.TU.supercontig_26.174 Family HMG 3D structure (top 5) 1GT0 2CS1 3F27 1HME 1HRY
	PDB entry: 1GT0 2CS1 3F27 1HME 1HRY 2E6O 1AAB 2EQZ 1CG7 1WZ6 1J46 2CO9 1K99 2LEF 2CRJ 1V64 2D7L 1WGF 3FGH 1WXL 1I11 2GZK 1CKT 1E7J 1V63 2YRQ

• ASGPB
• Phytozome

Look for sequence homologs using SIMAP@MIPS

SIMAP

Ortholog identification by INPARANOID

Arabidopsis lyrata

472304 Score: 1

Arabidopsis thaliana

AT1G20696.2 Score: 1

Coccomyxa sp. C-169

64336 Score: 1

Populus trichocarpa

642803 Score: 1

Selaginella moellendorffii

75453 Score: 1

Vitis vinifera

GSVIVP00002892001 Score: 1

• NCBI EST Profile Viewer (UniGene: At.21298)
• NCBI EST Profile Viewer (UniGene: At.27031)
• NCBI EST Profile Viewer (UniGene: Mtr.4125)
• NCBI EST Profile Viewer (UniGene: Pba.2795)
• NCBI EST Profile Viewer (UniGene: Pba.4003)
• NCBI EST Profile Viewer (UniGene: Pba.906)
• NCBI EST Profile Viewer (UniGene: Pth.16408)
• NCBI EST Profile Viewer (UniGene: Pth.906)
• NCBI EST Profile Viewer (UniGene: Ptp.11579)
• NCBI EST Profile Viewer (UniGene: Ptp.5369)
• NCBI EST Profile Viewer (UniGene: Vvi.7970)
• NCBI EST Profile Viewer (UniGene: Vvi.8094)

At.21298

Arabidopsis thaliana HMGB2 (HIGH MOBILITY GROUP B 2); transcription factor (HMGB2) mRNA, complete cds /cds=p(187,621) /gb=NM_101920

At.27031

Arabidopsis thaliana HMGB3 (HIGH MOBILITY GROUP B 3); transcription factor (HMGB3) mRNA, complete cds /cds=p(183,608) /gb=NM_101921

Mtr.4125

EST644064 GESD Medicago truncatula cDNA clone GESD-29G17, mRNA sequence /clone=GESD-29G17 /gb=CA990556

Pba.2795

WS0165.B21_B02 PT-DX-A-7 Populus trichocarpa cDNA clone WS0165_B02 3', mRNA sequence /clone=WS0165_B02 /clone_end=3' /gb=CV226711

Pba.4003

M123F09 Populus flower cDNA library Populus trichocarpa cDNA 5 prime, mRNA sequence /clone_end=5' /gb=BU868909

Pba.906

WS02523.BR_M09 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02523_M09 5', mRNA sequence /clone=WS02523_M09 /clone_end=5' /gb=DT478777

Pth.16408

WS01230.BR_P19 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01230_P19 5', mRNA sequence /clone=WS01230_P19 /clone_end=5' /gb=DT474146

Pth.906

Populus trichocarpa clone WS0116_C16 unknown mRNA /cds=p(138,572) /gb=EF146195

Ptp.11579

UL64PH10.5pR Populus cold stressed leaves cDNA library Populus tremula x Populus tremuloides cDNA clone UL64PH10 5', mRNA sequence /clone=UL64PH10 /clone_end=5' /gb=DN500585

Ptp.5369

A004P51.3pR Hybrid aspen plasmid library Populus tremula x Populus tremuloides cDNA clone A004P51 3', mRNA sequence /clone=A004P51 /clone_end=3' /gb=CK087349

Vvi.7970

VV_PEb17h09.b1 Vitis vinifera cv. perlette LibB Vitis vinifera cDNA, mRNA sequence /gb=EV235052

Vvi.8094

VV_PEd07c10.b1 Vitis vinifera cv. perlette LibD Vitis vinifera cDNA, mRNA sequence /gb=EV242681

protein sequence
transcript sequence